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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935691.1_cds_XP_016481463.1_72792
CDS Infomation

[gene=LOC107802468] [db_xref=GeneID:107802468] [protein=probable polygalacturonase At3g15720] [protein_id=XP_016481463.1] [location=complement(join(137009..137230,137313..137426,137501..137609,137699..137780,137874..138081,138186..138203,138600..138755,138845..138982,139072..139203))] [gbkey=CDS]
Sequence

ATGAAGATGCTCATCTCATACTTTCTTGCTCTACTACTTTTGCCTTCATTGGTTTTTTCA
GTACCTGATTCTCCAGTGTTTAATGTTCTGGATTATGGTGCAGTTGGAGATGGCTTGACC
GATACAACCAATGCTTTCAACAAAACATGGGAAGCAACATGCACATCATTGTCATCTTCT
CCGACGATGTACATTCCTTTTGGCAATACGTTCTTGATTCATCCCTTGATATTGAGTGGC
CCTTGCGTATCACCGGGCGTCACTATTGAGATAAATGGAAATATAGTTGCACCAATTGAA
CCCTCGGAATGGACGTGTTTGACCACTCATTGTGATAAGTGGATTTATATTAAACATGTT
AACGGCCTTACAGTACGTGGGAATGGAACAATTAATGGTCGGGGACAAAAATGGTGGGAT
GTTAATGACCGCAGGAAACCAACTGCTTTTGATATTTCACATTGCCAAAACATTAGTGTA
AGCGGACTAAGCTTTAAGGACAACCCTCACGTGCATTTTCATATTGAGAACTCCGAATCT
GCCACAGTCTCAAACATAACTATAGACGCCCCAGCGAAAAGTCCAAATACTGATGGTATT
CATCTTTCTAGCAGCCGAGACGTTTCCATTAACCATTGTCGAATTGGAACTGGGGAAGAT
TGTATCTCAATTGTAGATGGTTGTTCCAATCTGAAAATCAGCAACATAATATGCGGACCA
GGGCATGGTATAAGTATTGGAAGTCTAGGCAAGCATGGATCAAACGACACAGTTGAAAAT
GTTCTTGTCAGTGACGTGGTGTTCATAAAATCTACAAATGGTGCTCGAATAAAAACGTGG
CAGGGAGGCCAAGGGTACGCAAGGAACATCATTTTCGAGAGAATATTGTCGCAAGATTCT
CATAACCCTATAATTATTGATCAGTTCTATTGTGATCATGAAAACTGTACAGAACATGAT
TTAGCAGTACAGGTTAGTGGTATTACTTTTAGACAGATACTTGGAACTTCCCAAGGTGAA
TTTGCAGTGAAGCTGGATTGCAGTGCTAAAGTTCCATGTACGGGTATATTAATGGAGGAT
ATATACATCCGTTCAGGCACCAAAGGTGAAGCTAGATCGTATATTAATAGTGCACATGGA
TTTGTTAAGGGTCAAAATACACCTGAAATCCGCCTTTGA

Peptide Sequence

PEP ID

XP_016481463.1
PEP Infomation

PREDICTED: probable polygalacturonase At3g15720 [Nicotiana tabacum]
Sequence

MKMLISYFLALLLLPSLVFSVPDSPVFNVLDYGAVGDGLTDTTNAFNKTWEATCTSLSSS
PTMYIPFGNTFLIHPLILSGPCVSPGVTIEINGNIVAPIEPSEWTCLTTHCDKWIYIKHV
NGLTVRGNGTINGRGQKWWDVNDRRKPTAFDISHCQNISVSGLSFKDNPHVHFHIENSES
ATVSNITIDAPAKSPNTDGIHLSSSRDVSINHCRIGTGEDCISIVDGCSNLKISNIICGP
GHGISIGSLGKHGSNDTVENVLVSDVVFIKSTNGARIKTWQGGQGYARNIIFERILSQDS
HNPIIIDQFYCDHENCTEHDLAVQVSGITFRQILGTSQGEFAVKLDCSAKVPCTGILMED
IYIRSGTKGEARSYINSAHGFVKGQNTPEIRL

Transcript Sequence

Gene sequence data has not been registered.